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  1. Nov 28, 2023 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.

    • Blast

      QuickBLASTP is an accelerated version of BLASTP that is very...

    • Protein Blast

      Protein Blast - Basic Local Alignment Search Tool - BLAST

    • Nucleotide Blast

      Nucleotide Blast - Basic Local Alignment Search Tool - BLAST

    • Blastx

      Blastx - Basic Local Alignment Search Tool - BLAST

    • Saved Strategies

      clicking the 'Saved Search Strategy' link at the top of a...

    • Blast FAQ

      Use the Primer-BLAST tool to search with pair of primers....

    • Recent Results

      This page provides links to your unexpired BLAST jobs. Enter...

    • Blast Download Page

      We are always listening and welcome your feedback at BLAST...

  2. QuickBLASTP is an accelerated version of BLASTP that is very fast and works best if the target percent identity is 50% or more. BlastP simply compares a protein query to a protein database. PSI-BLAST allows the user to build a PSSM (position-specific scoring matrix) using the results of the first BlastP run.

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  6. The program compares nucleotide or protein sequences to sequence in a database and calculates the statistical significance of the matches. This chapter first provides an introduction to BLAST and then describes the practical application of different BLAST programs based on the BLAST Quick Start mini-course (www.ncbi.nlm.nih.gov/Class/minicourses).

  7. BLAST is a computer algorithm that can rapidly align and compare a query DNA sequence with a database of sequences. Learn how BLAST works, its applications in genomic research, and its history and development.

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